Spring 2010Talk Series on

Networks and Complex Systems

Every Monday 6-7p, Wells Library 001 ~ Optional Dinner at at Lennie's Afterwards

Description
This talk series is open to all Indiana University faculty and students interested in network analysis, modeling, visualization, and complex systems research. A major intent is to cross-fertilize between research done in the social and behavioral sciences, research in natural sciences such as biology or physics, but also research on Internet technologies. See also the Wikipedia entries on graph theory, small world networks, power law, and complex networks, and self organizing systems.

Organizer
Katy Börner <katy@indiana.edu> Victor H. Yngve Professor of Information Science, Cyberinfrastructure for Network Science Center, SLIS, IUB.

Time & Place
Every Monday 6:00-7:00pm in the Wells Library (formerly Main Library) at Indiana University, Bloomington, Room 001. Right after the Cognitive Science Colloquium Series. There is an optional dinner afterwards 7-9p at Lennie's.

Previous Talks
Fall 2004 | Spring 2005 | Fall 2005 | Spring 2006 | Fall 2006 | Spring 2007 | Fall 2007 | Spring 2008 | Fall 2008 | Spring 2009 | Fall 2009

Related Courses at IUB

Other Courses, not offered in Fall 09

Networks and Complex Systems Centers at Indiana University

Links to people, projects, groups, students, courses and news related to complex systems and networks research at Indiana University are also available via

Acknowledgement
This talk series is sponsored by the Cyberinfrastructure for Network Science Center and the School of Library and Information Science.

Related Talk Series
Cambridge Colloquium on Complexity and Social Networks organized by David Lazer at Harvard U
The Age of Networks speaker series organized by Noshir Contractor, UIUC & NCSA
NICO Seminars organized by NICO, Northwestern University

1/11Classes begin

1/18Martin Luther King Day

1/25 and 2/1No talks scheduled

2/8 Mathew Palakal & Jake Chen, School of Informatics and Computing, IUPUI

materials iconmaterials iconBibliomics, Literature Mining, and Knowledge Discovery

Abstract: Bibliomics plays an important role in Systems Biology research along with the other “omics” such as genomics, proteomics, metabolomics, etc. Biological literature databases continue to grow rapidly with vital information that is important for conducting sound biomedical research. As data and information space continue to grow exponentially, the need for rapidly surveying the published literature, synthesizing, and discovering the embedded "knowledge" is becoming critical to allow the researchers to conduct "informed" work, avoid repetition, and generate new hypotheses. Knowledge, in this case, is defined as one-to-many and many-to-many relationships among biological entities such as gene, protein, drug, disease, etc. In this talk, we present a literature mining system called BioMAP. The BioMAP tool can carry out large-scale biomedical literature mining that could enhance the ability of biological researchers to formulate methods for the analysis of biological data such as identifying biological pathways and provide support for disease target and new biomarker discovery. Results from a large-scale literature mining on documents related to colon rectal cancer will be presented to illustrate that novel pathways and biomarkers can be found if exhaustive mining is used instead of relying on limited manually curated literature documents.

Bio: Dr. Palakal is currently the Associate Dean for Research and Graduate Program in the School of Informatics and Professor of Computer Science in the School of Science. He is also the Director of Informatics Research Institute where he is leading numerous industry and community related projects. His lab, TiMAP (Text information Mining Analysis and Prediction) is currently focusing on problems related to biomedical and health literature mining to discover domain specific knowledge, see http://regen.cs.iupui.edu/research.

2/11 (Thursday)Bruce Weinberg, Department of Economics, OSU and Research Fellow, Institute for the Study of Labor, National Bureau of Economic Research

materials iconmaterials iconRecent Work on the Economics of Innovation

Abstract: This work comprises three interrelated components. The first studies shifts in scientific competitiveness over the course of the 20th century. The second component assesses the importance of knowledge spillovers among innovators. The third component studies changes in the age at which people make important scientific contributions
Scientific Competitiveness:

  1. “Scientific Leadership”: from Europe as a whole and Germany in particular to the US during the 20th Century;
  2. An Assessment of British Science over the 20th Century: the consistency of British scientific growth during an “American” Century;
  3. “Developing Science: Scientific Performance in the Developing World:”  A look at where scientists are being born, where they choose to research, and the parameters that explain why;
  4. “Scientific Revolutionaries: Geography, Vintage, and Participation in Scientific Revolutions:” A study of the role played by Geography and vintage in the development and diffusion of quantum physics.

Knowledge Spillovers: How knowledge spillovers among innovators generate innovation.
Age and Innovation:  The marked difference over time in the age-creativity relationship, with important contributions coming later in scientific careers

Bio: Dr. Weinberg's work combines theoretical and empirical interests. Most of his papers develop theoretical models and illustrate their importance empirically. His research also tends to be question-driven rather technique-driven. He tries to use whatever techniques (both theoretical and empirical) are most appropriate for addressing a particular question, and as a consequence employs a broad range of techniques. Much of his research, across the various areas of interest, draws on work in sociology and psychology, incorporating results from these literatures into economic models.

2/15 Matthias Scheutz, Cognitive Science, Computer Science, and Informatics, IUB

materials iconmaterials iconThe limited utility of communication for simple organisms

Abstract: Many forms of signaling have evolved in the animal kingdom for different purposes (including indicating food, signaling danger, and attracting mates). Yet, there are very few species that are capable of "representational signaling" or what we will call "communication". In this talk, we will report results from extensive artificial life simulations that point to the limited benefits communication has for simple agents in biologically inspired foraging tasks and show that communication can even have detrimental effects on performance in certain environments. Using a combination of statistical analyses of simulation results and complexity-theoretic considerations regarding the (computational) cost of components in agent control architectures, we will argue for the limited utility of communication for any kind of simple organism in an evolutionary setting. The upshot of the argument is that simple agents with simple architectures need very special environmental conditions for communication to benefit them and thus to evolve. We will conclude with a few speculative thoughts about what evolutionary pressures might have been at work in cases where communication did evolve.

Bio: Matthias Scheutz received degrees in philosophy (M.A. 1989, Ph.D. 1995) and formal logic (M.S. 1993) from the University of Vienna and in computer engineering (M.S. 1993) from the Vienna University of Technology (1993) in Austria. He also received the joint Ph.D. in cognitive science and computer science from Indiana University in 1999. Matthias is currently an associate professor of informatics and computer science in the School of Informatics and Computing, associate professor of cognitive science in the Cognitive Science Program and adjunct associate professor in the Department of Psychological and Brain Sciences in the College of Arts and Sciences at Indiana University where he also directs the Human-Robot Interaction Laboratory. He has over 100 peer-reviewed publications in artificial intelligence, artificial life, agent-based computing, natural language processing, cognitive modeling, robotics, swarms, human-robot interaction and foundations of computing and cognitive science. His current research and teaching interests include multi-scale agent-based models of social behavior and complex cognitive and affective robots with natural language capabilities for natural human-robot interaction.

2/22 David Hachen, Department of Sociology, University of Notre Dame

materials iconmaterials iconWeighted Reciprocity in a Human Communication Network

Abstract: Weighted reciprocity, the relative balance of interaction flows in a dyad, is an understudied topic in social network research because very few network datasets contain information on the frequency of contact between two people.  Using data on the calling patterns of 9 million subscribers of a cellular telephone network over a two month period in 2008, we find that weighted reciprocity has a long-tailed distribution, with most dyads characterized by reciprocity, but a significant minority of dyads being non-reciprocal.  We show that variability in the level of reciprocity is related to vertex similarity.  Dyads with vertices that are dissimilar in degree (as well as age and physical location) tend to be reciprocal, while dyads with degree similar vertices vary in their reciprocity levels.  Among degree-similar dyads, non-reciprocity is greater when the vertices are more dissimilar in their vertex strength, i.e. the extent  to which each party makes calls to other people.  These findings call into question sociological theories that view reciprocity as an outgrowth of strong ties among similar people.  Instead we propose a dynamic model in which tie decay among degree-similar dyads is less sensitive to  non-reciprocity.  While in general non-reciprocal dyads are less likely to persist than reciprocal ones, some non-reciprocal dyads persist and these dyads tend to be ones in which the vertices are similar. We conclude by speculating about the possible causes of this greater tolerance for non-reciprocity among degree similar dyads.

Bio: David Hachen is Associate Professor of Sociology and Co-Director Inter-Disciplinary Center for Network Science and Applications (iCeNSA) at the University of Notre Dame.  His major interest is in social networks, especially dynamic models of their evolution.  Through iCeNSA David works with other social scientists, physicists, mathematicians, computer scientists and electrical and civil engineers on a wide range of projects involving networks including the “Longitudinal Analysis and Modeling of Large-Scale Social Networks Based on Cell Phone Records,” the “Open Sourcing the Design of Civil Infrastructure,” and the recently created  Social/Cognitive Network Academic Research Center (SCNARC) funded by the Army Research Lab through the Network Science Collaborative Technology Alliance Program.  

3/4 (Thursday) | 4:00 pm James Hendler, Rensselaer Polytechnic Institute

materials iconmaterials iconLinked Open Data (as part of the NSF/JSMF Workshop on Mapping Science and Semantic Web)

Abstract: TBD

Bio: TBD

3/8No talk scheduled

3/15Spring Break

3/22 Alan Porter, Director, R&D Search Technology, Inc., Co-Director, Technology Policy & Assessment Center, Georgia Tech and Ismael Rafols, Technology Policy and Assessment Center, and School of Public policy. Georgia Institute of Technology, Atlanta, Georgia.

materials iconmaterials iconDiversity and Network Coherence as Indicators of Interdisciplinarity: Case Studies in Bionanoscience

Abstract: The multidimensional character and inherent conflict with categorisation of interdisciplinarity makes its mapping and evaluation a challenging task. We propose a conceptual framework that aims to capture interdisciplinarity in the wider sense of knowledge integration, by exploring the concepts of diversity and coherence. Disciplinary diversity indicators are developed to describe the heterogeneity of a bibliometric set viewed from predefined categories, i.e. using a top-down approach that locates the set on the global map of science. Network coherence indicators are constructed to measure the intensity of similarity relations within a bibliometric set, i.e. using a bottom-up approach, which reveals the structural consistency of the publications network. We carry out case studies on individual articles in bionanoscience to illustrate how these two perspectives identify different aspects of interdisciplinarity: disciplinary diversity indicates the largescale breadth of the knowledge base of a publication; network coherence reflects the novelty of its knowledge integration. We suggest that the combination of these two approaches may be useful for comparative studies of emergent scientific and technological fields, where new and controversial categorisations are accompanied by equally contested claims of novelty and interdisciplinarity.

Bio: Alan Porter is Professor Emeritus of Industrial & Systems Engineering, and of Public Policy, at Georgia Tech, where he remains Co-director of the Technology Policy and Assessment Center. He is also Director of R&D for Search Technology, Inc., Norcross, GA. He is author of some 220 articles and books, including Tech Mining (Wiley, 2005). Current research emphasizes research profiling, innovation indicators, science mapping, and forecasting of emerging technology innovation pathways.

Dr. Ismael Rafols is Research Fellow at SPRU (Science and Technology Policy Research), the University of Sussex, one of the world leading centres in innovation studies. He investigates the emergence and governance of hybrid scientific fields, such as bionanotechnology or synthetic biology, relying on expert interviews adn bibliometric tools. His recent research focuses on the development of mapping methods to identify areas/topics of knowledge integration.

3/29No talk scheduled

4/5 Yves Gingras, Canada Research Chair in History and Sociology of Science, Department of History, Université du Québec à Montréal, Canada

materials iconmaterials iconEvolution of Interdisciplinarity (1900-2008)

Abstract: Since the beginning of the 1990s, interdisciplinarity has often been promoted as a value in itself assuring either a superior kind of knowledge or a better way to tackle important social problems, viewed as always tresspassing disciplinary boundaries. But beyond the unending debates surrounding the definition of terms, like multi- inter- and trans-disciplinarity, the hard question remains: how can we measure interdisciplinary practices? The obvious way from a bibliometric point of view is of course to look at the pattern of journal citations. Though limited, this indicator at least provides a first empirical measure of the links between disciplines and specialties. Most papers on this topic however have analyzed only the recent period, usually after 1980. Thanks to the existence of the “Century of Science” database of Thomson-Reuters, we can now look at the long-term evolution of interdisciplinarity over a century and see if we can observe paterns. For the domains of the natural sciences and engineering (NSE) the data suggest a movement of opening up of the major disciplines to contributions from other disciplines over the period 1900-1945, followed by reinforcement of disciplinarity between 1945 and 1975, followed again, in the recent period (1975-2008) by a movement towards more interdisicplinarity. In biomedical sciences, the period 1945-1975, saw a followed since then by a continuous rise of interdisciplinarity, that is, a tendency for most disciplines to open up to other disciplines. The talk will discus the data, as well as the link between interdisciplinarity and scientific impact, in more details and suggest possible interpretations of the trends observed.

Bio: After having been trained in physics (B.Sc., M.Sc.) à Université Laval, Yves Gingras obtained a Ph.D. in History and sociopolitics of Science at Université de Montréal. His research interests cover the formation of scientific disciplines, the mathematization of the sciences and the bibliometric analysis of the transformation of the scientific field in the 20th century. He is Scientific director of the Observatory of Science and Technology (OST) at UQAM. Over the last few years, he published papers in Isis,History of Science, Journal of the History of Biology, Social Epistemology, Science and Engineering Ethics, Social Science information and Journal of the American Society for Information Science and Technology.

4/12 Paul Thompson, Dartmouth Medical School

materials iconmaterials iconCollaborative Utility-Theoretic Information Retrieval

Abstract: The Probability Ranking Principle, which states that documents should be ranked in decreasing order of probability of relevance based on all evidence available to the retrieval system in response to a query, has been served as a foundation for probabilistic information retrieval.  Utility-theoretic information retrieval has been proposed, but not developed to the extent which probabilistic retrieval has been.  This talk describes the experience with probabilistic information retrieval for single searchers and suggests implications for the development of collaborative utility-theoretic information retrieval.  This discussion will use the NIH-funded VIVO and eagle-i projects as examples of how utility-theoretic retrieval might be implemented.

Bio: Paul Thompson received his Ph.D. from the University of California, Berkeley, in 1986. His graduate research was on probabilistic information retrieval. He has worked in the field of information studies for over 25 years. He has published numerous papers, journal articles, and book chapters, and has served as a reviewer for various conferences, journals, and the National Science Foundation. From 1986-1988, he was an assistant professor at Drexel University's College of Information Studies. From 1988-1993, he was a member of PRC, Inc.'s (now part of Northrop Grumman) artificial intelligence development group, where he conducted research in natural language understanding and information retrieval. From 1993 until 2001, he worked for West Publishing Company (now West Group), conducting research on natural language understanding, information retrieval, machine learning / text categorization, and text mining. After joining Dartmouth College’s Thayer School of Engineering and Institute for Security Technology Studies in 2001, he continued his earlier research and began new research in the areas of semantic hacking, the application of Semantic Web technology to sensor networks, and question answering. He has also conducted research on control system security in the oil and gas industry with the Institute for Information Infrastructure Protection. He is currently an instructor in the Department of Genetics at the Dartmouth Medical School.

4/19 Una O. Osili, Associate Professor of Economics, Interim Director of Research at The Center on Philanthropy at Indiana University, Indianapolis, IN

materials iconmaterials iconTBD

Abstract: TBD

Bio: TBD

4/26 Guilherme Rocha, Department of Statistics, IUB

materials iconmaterials iconTBD

Abstract: TBD

Bio: TBD

Speakers in Spring 10 (*not confirmed):

  1. Feb 16 (Tue), 4-5p George Kampis*
  2. May 3 (finals week)? Steven Wallace, PTI*
  3. Geoffrey Fox, School of Informatics and Computing, IUB

Speakers in Fall 10 (*not confirmed):

  1. Bernice Prescosolido, Sociology*
  2. Bruce W. Herr*
  3. Mike McGinnis, Political Science, IUB: Evolving ontological framework*
  4. Scott Long, Sociology*
  5. Cassidy R. Sugimoto, SLIS, IUB
  6. James Moody, Duke University
  7. Russell/Joseph, STS, CNS, IUB
  8. Renaud Lambiotte, UK*
  9. Luis Rocha, IUB, DND*